Acidovorax caeni strain R-24608

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Paenacidovorax

Description

Acidovorax caeni strain R-24608 is a Gram-negative bacterium characterized by its rod shape. This strain exhibits facultative aerobic and anaerobic growth, enabling it to thrive in varying oxygen conditions. A notable feature of Acidovorax caeni R-24608 is that it is non-spore-forming, which implies that it does not produce spores as a means of survival under adverse conditions. The strain has a single replicon, which suggests a streamlined genetic organization typical of many bacteria. Accessions for this strain are recorded under the identifier FPBX00000000.1, providing a reference for researchers interested in genetic and genomic studies related to this organism. From an ecological perspective, the adaptability of Acidovorax caeni R-24608 to both aerobic and anaerobic environments may allow it to occupy diverse niches in various ecosystems, particularly in environments where organic matter decomposition occurs. Its metabolic versatility could play a role in biogeochemical cycles, enhancing nutrient turnover in soil and aquatic systems. Understanding the characteristics of this strain can contribute to insights into its potential applications in bioremediation or soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPaenacidovorax
SpeciesPaenacidovorax caeni
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax caeni strain R-24608 genome assembly, contig:

Gene Summary

Adenine Count

723778 bp

Thymine Count

706841 bp

Guanine Count

1346750 bp

Cytosine Count

1374966 bp

Genome Length

4152335 bp

Protein-coding Genes

3787 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpxSAMN04489707_10367Not AvailableNegative3351116 - 335238145739.1
atp-dependent clp protease proteolytic subunit clppSAMN04489707_10368Not AvailableNegative3352480 - 335308822153.7
trigger factorSAMN04489707_10369Not AvailableNegative3353226 - 335453948357.7
Trna-leuNot AvailableNot AvailablePositive3354617 - 3354703Not Available
multidrug efflux pump subunit acrbSAMN04489707_103611Not AvailableNegative3354797 - 3357991116687.0
rnd family efflux transporter, mfp subunitSAMN04489707_103612Not AvailableNegative3357999 - 335921342081.3
squalene synthase hpncSAMN04489707_103613Not AvailablePositive3359318 - 336022032366.8
l-serine ammonia-lyaseSAMN04489707_103614Not AvailablePositive3360341 - 336184352221.3
farnesyl-diphosphate farnesyltransferaseSAMN04489707_103615Not AvailablePositive3361962 - 336284633203.9
squalene-associated fad-dependent desaturaseSAMN04489707_103616Not AvailablePositive3362849 - 336414445327.8

Displaying genes 3111 – 3120 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.