Acidovorax caeni strain R-24608

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Paenacidovorax

Description

Acidovorax caeni strain R-24608 is a Gram-negative bacterium characterized by its rod shape. This strain exhibits facultative aerobic and anaerobic growth, enabling it to thrive in varying oxygen conditions. A notable feature of Acidovorax caeni R-24608 is that it is non-spore-forming, which implies that it does not produce spores as a means of survival under adverse conditions. The strain has a single replicon, which suggests a streamlined genetic organization typical of many bacteria. Accessions for this strain are recorded under the identifier FPBX00000000.1, providing a reference for researchers interested in genetic and genomic studies related to this organism. From an ecological perspective, the adaptability of Acidovorax caeni R-24608 to both aerobic and anaerobic environments may allow it to occupy diverse niches in various ecosystems, particularly in environments where organic matter decomposition occurs. Its metabolic versatility could play a role in biogeochemical cycles, enhancing nutrient turnover in soil and aquatic systems. Understanding the characteristics of this strain can contribute to insights into its potential applications in bioremediation or soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPaenacidovorax
SpeciesPaenacidovorax caeni
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax caeni strain R-24608 genome assembly, contig:

Gene Summary

Adenine Count

723778 bp

Thymine Count

706841 bp

Guanine Count

1346750 bp

Cytosine Count

1374966 bp

Genome Length

4152335 bp

Protein-coding Genes

3787 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane lipoprotein slybSAMN04489707_102016Not AvailablePositive2455318 - 245578816010.1
fkbp-type peptidyl-prolyl cis-trans isomerase slydSAMN04489707_102017Not AvailableNegative2455824 - 245634818838.3
50s ribosomal protein l16 3-hydroxylaseSAMN04489707_102018Not AvailablePositive2456401 - 245752542172.6
hypothetical proteinSAMN04489707_102019Not AvailablePositive2457535 - 245803818992.6
beta-barrel assembly machine subunit bamcSAMN04489707_102020Not AvailableNegative2458694 - 245979740310.4
4-hydroxy-tetrahydrodipicolinate synthaseSAMN04489707_102021Not AvailableNegative2459841 - 246073731887.8
ribonuclease hiSAMN04489707_102022Not AvailableNegative2460904 - 246135316456.6
methyltransferase domain-containing proteinSAMN04489707_102023Not AvailableNegative2461356 - 246212629507.5
hydroxyacylglutathione hydrolaseSAMN04489707_102024Not AvailablePositive2462131 - 246290127431.8
membrane-bound lytic murein transglycosylase dSAMN04489707_102025Not AvailablePositive2462898 - 246440355073.9

Displaying genes 2361 – 2370 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.