Acidovorax caeni strain R-24608

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Paenacidovorax

Description

Acidovorax caeni strain R-24608 is a Gram-negative bacterium characterized by its rod shape. This strain exhibits facultative aerobic and anaerobic growth, enabling it to thrive in varying oxygen conditions. A notable feature of Acidovorax caeni R-24608 is that it is non-spore-forming, which implies that it does not produce spores as a means of survival under adverse conditions. The strain has a single replicon, which suggests a streamlined genetic organization typical of many bacteria. Accessions for this strain are recorded under the identifier FPBX00000000.1, providing a reference for researchers interested in genetic and genomic studies related to this organism. From an ecological perspective, the adaptability of Acidovorax caeni R-24608 to both aerobic and anaerobic environments may allow it to occupy diverse niches in various ecosystems, particularly in environments where organic matter decomposition occurs. Its metabolic versatility could play a role in biogeochemical cycles, enhancing nutrient turnover in soil and aquatic systems. Understanding the characteristics of this strain can contribute to insights into its potential applications in bioremediation or soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPaenacidovorax
SpeciesPaenacidovorax caeni
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax caeni strain R-24608 genome assembly, contig:

Gene Summary

Adenine Count

723778 bp

Thymine Count

706841 bp

Guanine Count

1346750 bp

Cytosine Count

1374966 bp

Genome Length

4152335 bp

Protein-coding Genes

3787 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic murein transglycosylaseSAMN04489707_101089Not AvailablePositive1545775 - 154706445384.6
atp-dependent clp protease atp-binding subunit clpaSAMN04489707_101090Not AvailableNegative1547259 - 154961385795.0
atp-dependent clp protease adaptor protein clpsSAMN04489707_101091Not AvailableNegative1549670 - 155006214462.5
dna polymerase iii, alpha subunitSAMN04489707_101092Not AvailableNegative1550202 - 1553741131020.0
beta-barrel assembly machine subunit bamdSAMN04489707_101093Not AvailablePositive1553872 - 155466929794.1
hypothetical proteinSAMN04489707_101094Not AvailableNegative1554694 - 15549398997.63
hypothetical proteinSAMN04489707_101095Not AvailableNegative1554942 - 155623747736.4
membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domainSAMN04489707_101096Not AvailableNegative1556234 - 155739440237.6
3-oxoacid coa-transferase subunit bSAMN04489707_101097Not AvailableNegative1557638 - 155827622454.6
3-oxoacid coa-transferase subunit aSAMN04489707_101098Not AvailableNegative1558280 - 155898725209.3

Displaying genes 1541 – 1550 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.