Acidovorax caeni strain R-24608

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Paenacidovorax

Description

Acidovorax caeni strain R-24608 is a Gram-negative bacterium characterized by its rod shape. This strain exhibits facultative aerobic and anaerobic growth, enabling it to thrive in varying oxygen conditions. A notable feature of Acidovorax caeni R-24608 is that it is non-spore-forming, which implies that it does not produce spores as a means of survival under adverse conditions. The strain has a single replicon, which suggests a streamlined genetic organization typical of many bacteria. Accessions for this strain are recorded under the identifier FPBX00000000.1, providing a reference for researchers interested in genetic and genomic studies related to this organism. From an ecological perspective, the adaptability of Acidovorax caeni R-24608 to both aerobic and anaerobic environments may allow it to occupy diverse niches in various ecosystems, particularly in environments where organic matter decomposition occurs. Its metabolic versatility could play a role in biogeochemical cycles, enhancing nutrient turnover in soil and aquatic systems. Understanding the characteristics of this strain can contribute to insights into its potential applications in bioremediation or soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPaenacidovorax
SpeciesPaenacidovorax caeni
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax caeni strain R-24608 genome assembly, contig:

Gene Summary

Adenine Count

723778 bp

Thymine Count

706841 bp

Guanine Count

1346750 bp

Cytosine Count

1374966 bp

Genome Length

4152335 bp

Protein-coding Genes

3787 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN04489707_100930Not AvailableNegative1368729 - 137013850255.9
hydrophobic/amphiphilic exporter-1, hae1 familySAMN04489707_100931Not AvailableNegative1370135 - 1373278112666.0
membrane fusion protein, multidrug efflux systemSAMN04489707_100932Not AvailableNegative1373294 - 137456244761.7
diguanylate cyclase (ggdef) domain-containing proteinSAMN04489707_100933Not AvailableNegative1374639 - 137635461777.1
cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebscSAMN04489707_100934Not AvailablePositive1376408 - 137689016780.3
protein of unknown functionSAMN04489707_100935Not AvailablePositive1377006 - 13771555500.54
2-hydroxychromene-2-carboxylate isomeraseSAMN04489707_100936Not AvailablePositive1377182 - 137781422949.5
cbs domain-containing proteinSAMN04489707_100937Not AvailablePositive1377753 - 137964868697.3
dna polymerase-3 subunit epsilonSAMN04489707_100938Not AvailablePositive1379645 - 138029224680.2
dolichyl-phosphate-mannose-protein mannosyltransferaseSAMN04489707_100939Not AvailableNegative1380335 - 138191256873.0

Displaying genes 1371 – 1380 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.