Acidovorax caeni strain R-24608

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Paenacidovorax

Description

Acidovorax caeni strain R-24608 is a Gram-negative bacterium characterized by its rod shape. This strain exhibits facultative aerobic and anaerobic growth, enabling it to thrive in varying oxygen conditions. A notable feature of Acidovorax caeni R-24608 is that it is non-spore-forming, which implies that it does not produce spores as a means of survival under adverse conditions. The strain has a single replicon, which suggests a streamlined genetic organization typical of many bacteria. Accessions for this strain are recorded under the identifier FPBX00000000.1, providing a reference for researchers interested in genetic and genomic studies related to this organism. From an ecological perspective, the adaptability of Acidovorax caeni R-24608 to both aerobic and anaerobic environments may allow it to occupy diverse niches in various ecosystems, particularly in environments where organic matter decomposition occurs. Its metabolic versatility could play a role in biogeochemical cycles, enhancing nutrient turnover in soil and aquatic systems. Understanding the characteristics of this strain can contribute to insights into its potential applications in bioremediation or soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPaenacidovorax
SpeciesPaenacidovorax caeni
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax caeni strain R-24608 genome assembly, contig:

Gene Summary

Adenine Count

723778 bp

Thymine Count

706841 bp

Guanine Count

1346750 bp

Cytosine Count

1374966 bp

Genome Length

4152335 bp

Protein-coding Genes

3787 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, lysr familySAMN04489707_100764Not AvailableNegative1158384 - 115933734239.4
glutaryl-coa dehydrogenaseSAMN04489707_100765Not AvailablePositive1159466 - 116066243150.7
crotonobetainyl-coa:carnitine coa-transferase caibSAMN04489707_100766Not AvailablePositive1160787 - 116204944427.0
hypothetical proteinSAMN04489707_100767Not AvailablePositive1162159 - 11624078040.59
protein of unknown functionSAMN04489707_100768Not AvailablePositive1162430 - 116306523319.6
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN04489707_100769Not AvailableNegative1163251 - 116597798968.6
abc-type amino acid transport substrate-binding proteinSAMN04489707_100770Not AvailableNegative1166044 - 116686230540.7
putative two-component system response regulatorSAMN04489707_100771Not AvailableNegative1167078 - 116820841870.6
two-component system, unclassified family, sensor histidine kinase and response regulatorSAMN04489707_100772Not AvailableNegative1168244 - 1173028173196.0
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN04489707_100773Not AvailableNegative1173035 - 117558494683.9

Displaying genes 1201 – 1210 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.