Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit c | SAMN05216364_100670 | Not Available | Positive | 896599 - 897297 | 24984.5 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit d | SAMN05216364_100671 | Not Available | Positive | 897327 - 897959 | 22555.5 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit e | SAMN05216364_100672 | Not Available | Positive | 897999 - 898613 | 21963.8 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit f | SAMN05216364_100673 | Not Available | Positive | 898679 - 899953 | 47745.9 |
| alpha-galactosidase | SAMN05216364_100674 | Not Available | Positive | 900272 - 902323 | 79126.4 |
| opacity protein | SAMN05216364_100675 | Not Available | Negative | 902373 - 903635 | 46936.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216364_100676 | Not Available | Negative | 903632 - 904201 | 21946.5 |
| nigd-like protein | SAMN05216364_100677 | Not Available | Negative | 904239 - 904991 | 28002.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216364_100678 | Not Available | Negative | 905008 - 905973 | 35231.2 |
| 2-isopropylmalate synthase | SAMN05216364_100679 | Not Available | Positive | 906361 - 907848 | 54205.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
