Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, badm/rrf2 family | SAMN05216364_1004106 | Not Available | Negative | 668419 - 668850 | 16507.3 |
| sodium/proton antiporter, nhad family | SAMN05216364_1004107 | Not Available | Negative | 668957 - 670387 | 52835.1 |
| alpha-amylase | SAMN05216364_1004108 | Not Available | Negative | 670517 - 671851 | 52142.7 |
| (1->4)-alpha-d-glucan synthase (adp-glucose) | SAMN05216364_1004109 | Not Available | Negative | 671886 - 673142 | 47438.1 |
| glycogen debranching enzyme, putative | SAMN05216364_1004110 | Not Available | Negative | 673217 - 675157 | 75086.3 |
| membrane associated serine protease, rhomboid family | SAMN05216364_1004111 | Not Available | Positive | 675292 - 675978 | 25587.5 |
| inosine-uridine nucleoside n-ribohydrolase | SAMN05216364_1004112 | Not Available | Negative | 675970 - 676983 | 37449.4 |
| diaminopimelate dehydrogenase | SAMN05216364_1004113 | Not Available | Positive | 677235 - 678131 | 32484.3 |
| prolipoprotein diacylglyceryl transferase | SAMN05216364_1004114 | Not Available | Positive | 678163 - 679056 | 34607.9 |
| flavorubredoxin | SAMN05216364_1004115 | Not Available | Positive | 679090 - 680322 | 46079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
