Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit beta | SAMN05216364_100446 | Not Available | Positive | 607568 - 608692 | 41515.9 |
| dna polymerase-3 subunit epsilon | SAMN05216364_100447 | Not Available | Positive | 608696 - 609466 | 29386.1 |
| hypothetical protein | SAMN05216364_100448 | Not Available | Positive | 609477 - 610172 | 26542.1 |
| trna pseudouridine38-40 synthase | SAMN05216364_100449 | Not Available | Positive | 610182 - 610937 | 28628.3 |
| upf0176 protein | SAMN05216364_100450 | Not Available | Positive | 611017 - 612024 | 38351.9 |
| respiratory nitrite reductase specific cytochrome c biogenesis protein nrfm | SAMN05216364_100451 | Not Available | Negative | 612009 - 612803 | 30483.8 |
| resb-like family protein | SAMN05216364_100452 | Not Available | Negative | 612806 - 614053 | 46679.2 |
| nitrite reductase (cytochrome c-552) | SAMN05216364_100453 | Not Available | Negative | 614054 - 615553 | 56624.1 |
| cytochrome c nitrite reductase small subunit | SAMN05216364_100454 | Not Available | Negative | 615575 - 616180 | 22887.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05216364_100455 | Not Available | Positive | 616310 - 616993 | 25643.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
