Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216364_100426 | Not Available | Positive | 579394 - 582567 | 116873.0 |
| starch-binding associating with outer membrane | SAMN05216364_100427 | Not Available | Positive | 582596 - 584260 | 61182.4 |
| hypothetical protein | SAMN05216364_100428 | Not Available | Positive | 584300 - 585937 | 60837.8 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN05216364_100429 | Not Available | Positive | 586017 - 587720 | 62424.3 |
| alpha-n-arabinofuranosidase | SAMN05216364_100430 | Not Available | Positive | 587760 - 589364 | 60026.1 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05216364_100431 | Not Available | Negative | 589361 - 590797 | 53022.9 |
| hypothetical protein | SAMN05216364_100432 | Not Available | Negative | 590954 - 591460 | 19432.9 |
| uncharacterized conserved protein | SAMN05216364_100433 | Not Available | Positive | 591497 - 591745 | 9151.9 |
| peptidylprolyl isomerase/fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN05216364_100434 | Not Available | Negative | 591751 - 592314 | 21163.8 |
| glycyl-trna synthetase | SAMN05216364_100435 | Not Available | Negative | 592375 - 593916 | 59492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
