Porphyromonadaceae bacterium KHP3R9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium KHP3R9 is characterized by having a single replicon, which indicates a streamlined genomic organization that may influence its metabolic capabilities and adaptability. The bacterium is cataloged under the accession number FPBR00000000.1, which allows for easy identification and retrieval of its genomic sequence for further studies. As a member of the Porphyromonadaceae family, KHP3R9 is likely involved in anaerobic processes, possibly contributing to the degradation of complex organic materials in its ecological niche. This family is known for its role in various biogeochemical cycles, particularly in environments rich in organic matter, such as sediments and the gastrointestinal tracts of animals. The presence of a single replicon suggests that KHP3R9 may have a simpler regulatory mechanism for gene expression and replication, which could confer advantages in specific environmental conditions where rapid adaptation is essential. Understanding the genomic and ecological roles of Porphyromonadaceae bacterium KHP3R9 could provide insights into its contributions to nutrient cycling and its potential applications in biotechnology, particularly in waste treatment or bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium KHP3R9 genome assembly, contig:

Gene Summary

Adenine Count

869255 bp

Thymine Count

865231 bp

Guanine Count

816631 bp

Cytosine Count

817163 bp

Genome Length

3368280 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane fusion protein, multidrug efflux systemSAMN05216364_100139Not AvailablePositive53714 - 5482940716.2
multidrug efflux pumpSAMN05216364_100140Not AvailablePositive54834 - 57887113496.0
outer membrane protein tolcSAMN05216364_100141Not AvailablePositive57880 - 5921450780.4
glutamate synthase (nadph/nadh) small chainSAMN05216364_100142Not AvailableNegative59203 - 6066953539.8
glutamate synthase (nadph/nadh) small chain/ferredoxin--nadp+ reductaseSAMN05216364_100143Not AvailableNegative60683 - 6146527910.4
hypothetical proteinSAMN05216364_100144Not AvailableNegative61527 - 616434598.77
Tmrna,resume consensus sequence (at 89): aataactggcaataacaaNot AvailableNot AvailablePositive61647 - 62045Not Available
outer membrane protein, cobalt-zinc-cadmium efflux systemSAMN05216364_100146Not AvailableNegative62148 - 6343448073.6
cobalt-zinc-cadmium resistance protein czcaSAMN05216364_100147Not AvailableNegative63434 - 66514113370.0
membrane fusion protein, cobalt-zinc-cadmium efflux systemSAMN05216364_100148Not AvailableNegative66519 - 6761939967.9

Displaying genes 41 – 50 of 2830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.