Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase-1 | SAMN05216364_10921 | Not Available | Negative | 3347561 - 3349162 | 58973.8 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05216364_10941 | Not Available | Negative | 3351206 - 3352045 | 31700.3 |
| transposase is116/is110/is902 family protein | SAMN05216364_10951 | Not Available | Negative | 3353396 - 3354364 | 36312.4 |
| hypothetical protein | SAMN05216364_10952 | Not Available | Positive | 3354380 - 3354459 | 2878.52 |
| transposase (or an inactivated derivative) | SAMN05216364_10961 | Not Available | Positive | 3354564 - 3355724 | 44881.2 |
| putative transposase | SAMN05216364_10971 | Not Available | Negative | 3356111 - 3356935 | 31946.4 |
| transposase | SAMN05216364_10972 | Not Available | Negative | 3356950 - 3357225 | 10477.7 |
| hypothetical protein | SAMN05216364_10973 | Not Available | Negative | 3357251 - 3357383 | 5114.32 |
| hypothetical protein | SAMN05216364_10981 | Not Available | Positive | 3357443 - 3358213 | 29924.7 |
| hypothetical protein | SAMN05216364_10991 | Not Available | Negative | 3358768 - 3358998 | 8512.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
