Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN05216364_10763 | Not Available | Negative | 3299026 - 3301020 | 75305.4 |
| hypothetical protein | SAMN05216364_10764 | Not Available | Negative | 3301401 - 3301592 | 7078.66 |
| transposase, is5 family | SAMN05216364_10765 | Not Available | Negative | 3301747 - 3301911 | 6745.26 |
| transposase dde domain-containing protein | SAMN05216364_10771 | Not Available | Positive | 3302023 - 3302427 | 16157.6 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05216364_10772 | Not Available | Positive | 3302923 - 3304428 | 54761.4 |
| parallel beta-helix repeat (two copies) | SAMN05216364_10773 | Not Available | Positive | 3304462 - 3306573 | 80330.0 |
| helix-turn-helix domain-containing protein | SAMN05216364_10774 | Not Available | Positive | 3306758 - 3306868 | 4247.27 |
| transposase c of is166 homeodomain-containing protein | SAMN05216364_10781 | Not Available | Positive | 3307016 - 3307483 | 18522.1 |
| capsular exopolysaccharide family | SAMN05216364_10782 | Not Available | Negative | 3307748 - 3310090 | 88598.3 |
| polysaccharide export outer membrane protein | SAMN05216364_10783 | Not Available | Negative | 3310087 - 3310893 | 29394.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
