Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-arabinofuranosidase | SAMN05216364_10596 | Not Available | Positive | 3166189 - 3167730 | 58049.7 |
| l-ribulokinase | SAMN05216364_10597 | Not Available | Positive | 3167745 - 3169418 | 62066.4 |
| Trna-val | Not Available | Not Available | Positive | 3169492 - 3169566 | Not Available |
| hypothetical protein | SAMN05216364_10599 | Not Available | Negative | 3169645 - 3169771 | 5062.16 |
| hypothetical protein | SAMN05216364_10601 | Not Available | Positive | 3169772 - 3170254 | 17608.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05216364_10602 | Not Available | Positive | 3170269 - 3171192 | 33599.6 |
| cytochrome c-type biogenesis protein ccsb | SAMN05216364_10603 | Not Available | Positive | 3171409 - 3173850 | 92327.0 |
| predicted dehydrogenase | SAMN05216364_10604 | Not Available | Positive | 3173854 - 3174834 | 36507.4 |
| uracil permease | SAMN05216364_10605 | Not Available | Negative | 3174916 - 3176124 | 42090.5 |
| protein of unknown function | SAMN05216364_10606 | Not Available | Positive | 3176306 - 3176836 | 20375.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
