Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | SAMN05216364_104811 | Not Available | Positive | 3012745 - 3013896 | 41363.1 |
| n-acetylneuraminate lyase | SAMN05216364_104812 | Not Available | Negative | 3014055 - 3014981 | 33840.2 |
| sugar phosphate permease | SAMN05216364_104813 | Not Available | Negative | 3015150 - 3016439 | 46885.0 |
| cyclically-permuted mutarotase family protein | SAMN05216364_104814 | Not Available | Negative | 3016436 - 3017539 | 39966.7 |
| helix-turn-helix domain-containing protein | SAMN05216364_104815 | Not Available | Positive | 3017795 - 3017995 | 7720.37 |
| atp-binding cassette, subfamily b/atp-binding cassette, subfamily b, msba | SAMN05216364_10492 | Not Available | Positive | 3019806 - 3021641 | 68909.4 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05216364_10493 | Not Available | Negative | 3021633 - 3023585 | 73783.2 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05216364_10494 | Not Available | Negative | 3023697 - 3024278 | 21937.7 |
| carboxyl-terminal processing protease | SAMN05216364_10495 | Not Available | Negative | 3024271 - 3025971 | 63685.9 |
| dcmp deaminase | SAMN05216364_10496 | Not Available | Negative | 3025995 - 3026417 | 15730.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
