Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN05216364_10463 | Not Available | Positive | 2968259 - 2969485 | 47595.2 |
| metal dependent phosphohydrolase | SAMN05216364_10464 | Not Available | Positive | 2969688 - 2970155 | 17729.2 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05216364_10465 | Not Available | Negative | 2970235 - 2971338 | 41473.2 |
| snoal-like domain-containing protein | SAMN05216364_10466 | Not Available | Negative | 2971669 - 2972025 | 13696.4 |
| hypothetical protein | SAMN05216364_10467 | Not Available | Negative | 2972037 - 2972450 | 15503.3 |
| 2'-5' rna ligase superfamily protein | SAMN05216364_10468 | Not Available | Negative | 2972455 - 2972991 | 20823.7 |
| dna binding domain-containing protein, excisionase family | SAMN05216364_10469 | Not Available | Negative | 2973092 - 2973406 | 12379.0 |
| helix-turn-helix domain-containing protein | SAMN05216364_104610 | Not Available | Negative | 2973396 - 2973683 | 11567.0 |
| hypothetical protein | SAMN05216364_104611 | Not Available | Positive | 2974415 - 2974627 | 8033.36 |
| protein of unknown function | SAMN05216364_104612 | Not Available | Positive | 2974629 - 2974853 | 8866.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
