Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 43 | SAMN05216364_10455 | Not Available | Negative | 2951209 - 2952210 | 38256.6 |
| protein of unknown function | SAMN05216364_10456 | Not Available | Negative | 2952398 - 2954839 | 91738.9 |
| o-glycosyl hydrolase | SAMN05216364_10457 | Not Available | Negative | 2954859 - 2956442 | 59148.7 |
| starch-binding associating with outer membrane | SAMN05216364_10458 | Not Available | Negative | 2956525 - 2958153 | 61731.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216364_10459 | Not Available | Negative | 2958159 - 2961191 | 112533.0 |
| hypothetical protein | SAMN05216364_104510 | Not Available | Negative | 2961208 - 2962713 | 56976.5 |
| signal transduction histidine kinase | SAMN05216364_104511 | Not Available | Positive | 2963089 - 2967159 | 155043.0 |
| helix-turn-helix domain-containing protein | SAMN05216364_104512 | Not Available | Positive | 2967418 - 2967518 | 3864.73 |
| integrase core domain-containing protein | SAMN05216364_10461 | Not Available | Positive | 2967519 - 2967830 | 12329.0 |
| Trna-phe | Not Available | Not Available | Positive | 2967933 - 2968005 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
