Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose 5-phosphate 4-epimerase | SAMN05216364_104110 | Not Available | Negative | 2881331 - 2882020 | 25491.4 |
| alpha-n-arabinofuranosidase | SAMN05216364_104111 | Not Available | Negative | 2882242 - 2883783 | 58197.7 |
| signal transduction histidine kinase | SAMN05216364_104112 | Not Available | Negative | 2884089 - 2885804 | 66081.4 |
| hypothetical protein | SAMN05216364_104113 | Not Available | Negative | 2886171 - 2886381 | 8203.86 |
| sir2-like domain-containing protein | SAMN05216364_10421 | Not Available | Negative | 2886477 - 2888309 | 70856.7 |
| type i restriction enzyme, s subunit | SAMN05216364_10422 | Not Available | Negative | 2888311 - 2889546 | 46207.5 |
| type i restriction enzyme m protein | SAMN05216364_10423 | Not Available | Negative | 2889543 - 2890967 | 54097.8 |
| type i restriction enzyme, r subunit | SAMN05216364_10424 | Not Available | Negative | 2890972 - 2893359 | 91281.0 |
| hypothetical protein | SAMN05216364_10425 | Not Available | Negative | 2893548 - 2893673 | 4708.65 |
| ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase) | SAMN05216364_10426 | Not Available | Negative | 2893663 - 2894769 | 43625.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
