Porphyromonadaceae bacterium KHP3R9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium KHP3R9 is characterized by having a single replicon, which indicates a streamlined genomic organization that may influence its metabolic capabilities and adaptability. The bacterium is cataloged under the accession number FPBR00000000.1, which allows for easy identification and retrieval of its genomic sequence for further studies. As a member of the Porphyromonadaceae family, KHP3R9 is likely involved in anaerobic processes, possibly contributing to the degradation of complex organic materials in its ecological niche. This family is known for its role in various biogeochemical cycles, particularly in environments rich in organic matter, such as sediments and the gastrointestinal tracts of animals. The presence of a single replicon suggests that KHP3R9 may have a simpler regulatory mechanism for gene expression and replication, which could confer advantages in specific environmental conditions where rapid adaptation is essential. Understanding the genomic and ecological roles of Porphyromonadaceae bacterium KHP3R9 could provide insights into its contributions to nutrient cycling and its potential applications in biotechnology, particularly in waste treatment or bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium KHP3R9 genome assembly, contig:

Gene Summary

Adenine Count

869255 bp

Thymine Count

865231 bp

Guanine Count

816631 bp

Cytosine Count

817163 bp

Genome Length

3368280 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216364_10402Not AvailableNegative2840462 - 284075511040.2
hydrophobic/amphiphilic exporter-1, hae1 familySAMN05216364_10403Not AvailableNegative2840774 - 2843911115023.0
rnd family efflux transporter, mfp subunitSAMN05216364_10404Not AvailableNegative2843942 - 284496437013.6
outer membrane protein tolcSAMN05216364_10405Not AvailableNegative2844997 - 284644554235.5
transcriptional regulator, tetr familySAMN05216364_10406Not AvailableNegative2846467 - 284699721101.3
transcriptional regulator, lyttr familySAMN05216364_10407Not AvailableNegative2847166 - 284797831055.0
predicted membrane proteinSAMN05216364_10408Not AvailableNegative2848024 - 284878828488.2
hypothetical proteinSAMN05216364_10409Not AvailablePositive2848981 - 284954120707.4
tigr02453 family proteinSAMN05216364_104010Not AvailablePositive2849538 - 285023627549.3
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseSAMN05216364_104011Not AvailablePositive2850247 - 285105930164.5

Displaying genes 2331 – 2340 of 2830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.