Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216364_103414 | Not Available | Negative | 2695787 - 2699287 | 130487.0 |
| sugar phosphate isomerase/epimerase | SAMN05216364_103415 | Not Available | Negative | 2699455 - 2700390 | 35868.4 |
| hypothetical protein | SAMN05216364_103416 | Not Available | Negative | 2700562 - 2700773 | 8465.5 |
| hth-like domain-containing protein | SAMN05216364_10351 | Not Available | Negative | 2700774 - 2701290 | 19845.2 |
| transposase | SAMN05216364_10352 | Not Available | Negative | 2701341 - 2701640 | 11586.9 |
| hypothetical protein | SAMN05216364_10353 | Not Available | Negative | 2701853 - 2703658 | 70153.9 |
| alpha-l-rhamnosidase | SAMN05216364_10354 | Not Available | Negative | 2703718 - 2704302 | 22318.8 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05216364_10355 | Not Available | Negative | 2704451 - 2705683 | 45374.7 |
| hypothetical protein | SAMN05216364_10356 | Not Available | Negative | 2705751 - 2707376 | 61058.4 |
| right handed beta helix region | SAMN05216364_10357 | Not Available | Negative | 2707527 - 2709134 | 59622.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
