Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | SAMN05216364_102721 | Not Available | Positive | 2429177 - 2429713 | 20087.4 |
| alanine dehydrogenase | SAMN05216364_102722 | Not Available | Positive | 2429710 - 2430918 | 43831.4 |
| hypothetical protein | SAMN05216364_102723 | Not Available | Positive | 2431204 - 2431329 | 4688.91 |
| phosphohistidine phosphatase | SAMN05216364_102724 | Not Available | Negative | 2431495 - 2431983 | 18311.2 |
| protein of unknown function | SAMN05216364_102725 | Not Available | Negative | 2432021 - 2432284 | 10154.0 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05216364_102726 | Not Available | Negative | 2432367 - 2433098 | 27353.9 |
| putative efflux protein, mate family | SAMN05216364_102727 | Not Available | Negative | 2433053 - 2434414 | 49254.6 |
| Trna-gly | Not Available | Not Available | Positive | 2434457 - 2434532 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2434548 - 2434630 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05216364_102730 | Not Available | Negative | 2434658 - 2435149 | 17690.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
