Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | SAMN05216364_101418 | Not Available | Positive | 1633841 - 1634293 | 16638.2 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05216364_101419 | Not Available | Positive | 1634298 - 1634627 | 12598.1 |
| deoxyribose-phosphate aldolase | SAMN05216364_101420 | Not Available | Positive | 1634641 - 1635513 | 31886.8 |
| beta-galactosidase | SAMN05216364_101421 | Not Available | Positive | 1635542 - 1638937 | 129273.0 |
| hsp20 family protein | SAMN05216364_101422 | Not Available | Positive | 1639062 - 1639580 | 20034.9 |
| octaprenyl-diphosphate synthase | SAMN05216364_101423 | Not Available | Negative | 1639640 - 1640614 | 36502.8 |
| dna polymerase i | SAMN05216364_101424 | Not Available | Positive | 1640709 - 1643504 | 106196.0 |
| membrane protein yqaa, snare-associated domain | SAMN05216364_101425 | Not Available | Positive | 1643507 - 1643959 | 16354.3 |
| wyosine | SAMN05216364_101426 | Not Available | Positive | 1643987 - 1644766 | 29494.8 |
| protein of unknown function | SAMN05216364_101427 | Not Available | Negative | 1644840 - 1646006 | 44497.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
