Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KHP3R9 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869255 bp
Thymine Count
865231 bp
Guanine Count
816631 bp
Cytosine Count
817163 bp
Genome Length
3368280 bp
Protein-coding Genes
2784 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | SAMN05216364_101321 | Not Available | Positive | 1559035 - 1560108 | 40346.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN05216364_101322 | Not Available | Positive | 1560116 - 1561792 | 61548.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN05216364_101323 | Not Available | Positive | 1561789 - 1562610 | 30388.7 |
| o-succinylbenzoate synthase | SAMN05216364_101324 | Not Available | Positive | 1562623 - 1563687 | 40120.1 |
| o-succinylbenzoic acid--coa ligase | SAMN05216364_101325 | Not Available | Positive | 1563668 - 1564765 | 39886.5 |
| putative n6-adenine-specific dna methylase | SAMN05216364_101326 | Not Available | Negative | 1564724 - 1566139 | 53707.0 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05216364_101327 | Not Available | Negative | 1566181 - 1567749 | 60335.7 |
| transporter, cpa2 family | SAMN05216364_101328 | Not Available | Negative | 1567758 - 1569839 | 76083.9 |
| excinuclease abc subunit a | SAMN05216364_101329 | Not Available | Positive | 1569947 - 1572763 | 105481.0 |
| protein of unknown function | SAMN05216364_101330 | Not Available | Negative | 1572768 - 1573163 | 14595.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
