Porphyromonadaceae bacterium KHP3R9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium KHP3R9 is characterized by having a single replicon, which indicates a streamlined genomic organization that may influence its metabolic capabilities and adaptability. The bacterium is cataloged under the accession number FPBR00000000.1, which allows for easy identification and retrieval of its genomic sequence for further studies. As a member of the Porphyromonadaceae family, KHP3R9 is likely involved in anaerobic processes, possibly contributing to the degradation of complex organic materials in its ecological niche. This family is known for its role in various biogeochemical cycles, particularly in environments rich in organic matter, such as sediments and the gastrointestinal tracts of animals. The presence of a single replicon suggests that KHP3R9 may have a simpler regulatory mechanism for gene expression and replication, which could confer advantages in specific environmental conditions where rapid adaptation is essential. Understanding the genomic and ecological roles of Porphyromonadaceae bacterium KHP3R9 could provide insights into its contributions to nutrient cycling and its potential applications in biotechnology, particularly in waste treatment or bioremediation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium KHP3R9 genome assembly, contig:

Gene Summary

Adenine Count

869255 bp

Thymine Count

865231 bp

Guanine Count

816631 bp

Cytosine Count

817163 bp

Genome Length

3368280 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
long-chain acyl-coa synthetaseSAMN05216364_101033Not AvailablePositive1312642 - 131444768750.9
leucyl-trna synthetaseSAMN05216364_101034Not AvailablePositive1314499 - 1317252105360.0
uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domainsSAMN05216364_101035Not AvailablePositive1317258 - 131813331926.0
nte family proteinSAMN05216364_101036Not AvailableNegative1318138 - 132035783384.7
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN05216364_101037Not AvailableNegative1320388 - 132148840604.4
protein of unknown functionSAMN05216364_101038Not AvailableNegative1321562 - 132254837324.8
23s rrna m(2)a-2503 methyltransferaseSAMN05216364_101039Not AvailableNegative1322666 - 132368238191.5
lysylphosphatidylglycerol synthase tm regionSAMN05216364_101040Not AvailableNegative1323720 - 132471237444.4
aminomethyltransferaseSAMN05216364_101041Not AvailableNegative1324754 - 132583939554.7
peptidase t. metallo peptidase. merops family m20bSAMN05216364_101042Not AvailableNegative1325857 - 132708045892.9

Displaying genes 1111 – 1120 of 2830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.