Polaromonas sp. YR568

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas sp. YR568 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This organism is notable for having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic data for Polaromonas sp. YR568 is available under the accession number FPBM00000000.1. In terms of ecological significance, members of the genus Polaromonas are typically found in cold environments, such as glacial ice and permafrost, where they play a role in biogeochemical cycles. Their ability to thrive in extreme conditions suggests potential adaptations that allow them to metabolize nutrients effectively in low-temperature habitats. The presence of flagella not only aids in movement but may also enhance their ability to colonize surfaces in these challenging environments. Overall, Polaromonas sp. YR568 exemplifies the resilience and ecological versatility of microorganisms in extreme habitats, contributing to our understanding of microbial life in cold ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas sp. YR568
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaromonas sp. YR568 genome assembly, contig: Ga0066766_122,

Gene Summary

Adenine Count

900787 bp

Thymine Count

893662 bp

Guanine Count

1505204 bp

Cytosine Count

1526505 bp

Genome Length

4827503 bp

Protein-coding Genes

4448 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-barrel assembly machine subunit bambSAMN05216350_10191Not AvailableNegative99490 - 10065340593.6
putative negative regulator of rcsb-dependent stress responseSAMN05216350_10192Not AvailableNegative100650 - 10133925571.0
histidyl-trna synthetaseSAMN05216350_10193Not AvailableNegative101436 - 10278549043.5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseSAMN05216350_10194Not AvailableNegative102791 - 10406845886.2
cytoskeleton protein rodzSAMN05216350_10195Not AvailableNegative104068 - 10509333947.1
type iv pilus assembly protein pilfSAMN05216350_10196Not AvailableNegative105086 - 10589530261.6
23s rrna m(2)a-2503 methyltransferaseSAMN05216350_10197Not AvailableNegative105892 - 10704041808.5
nucleoside diphosphate kinaseSAMN05216350_10198Not AvailableNegative107121 - 10754615092.3
16s ribosomal rna . bacterial ssuNot AvailableNot AvailablePositive108914 - 11044618.01
ribosomal large subunit pseudouridine synthase bSAMN05216350_10199Not AvailableNegative107676 - 10929257188.2

Displaying genes 91 – 100 of 4506 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.