Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | SAMN04489724_1288 | Not Available | Negative | 1005577 - 1006194 | 24148.1 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN04489724_1289 | Not Available | Positive | 1006518 - 1007984 | 53053.8 |
| histidine kinase | SAMN04489724_1290 | Not Available | Positive | 1008561 - 1009964 | 53853.9 |
| dna-binding response regulator, lytr/algr family | SAMN04489724_1291 | Not Available | Positive | 1009966 - 1010649 | 25925.2 |
| arac-type dna-binding protein | SAMN04489724_1292 | Not Available | Negative | 1010652 - 1011524 | 33694.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN04489724_1293 | Not Available | Positive | 1011690 - 1012739 | 38957.1 |
| arac-type dna-binding protein | SAMN04489724_1294 | Not Available | Positive | 1013223 - 1014116 | 33932.5 |
| gluconate kinase, fggy family | SAMN04489724_1295 | Not Available | Positive | 1014130 - 1015650 | 56217.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489724_1296 | Not Available | Positive | 1015975 - 1019238 | 118571.0 |
| starch-binding associating with outer membrane | SAMN04489724_1297 | Not Available | Positive | 1019243 - 1020796 | 56881.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
