Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | SAMN04489724_0468 | Not Available | Negative | 90676 - 92130 | 53921.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04489724_0469 | Not Available | Negative | 92140 - 92838 | 26848.5 |
| fic/doc family protein | SAMN04489724_0470 | Not Available | Negative | 93153 - 94109 | 36611.4 |
| Trna-ser | Not Available | Not Available | Positive | 95747 - 95838 | Not Available |
| hypothetical protein | SAMN04489724_0473 | Not Available | Positive | 96140 - 96394 | 9679.49 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN04489724_0474 | Not Available | Negative | 96440 - 97651 | 45887.6 |
| o-succinylbenzoate synthase | SAMN04489724_0475 | Not Available | Positive | 97723 - 98805 | 40425.8 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN04489724_0476 | Not Available | Negative | 98802 - 99926 | 40982.0 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN04489724_0477 | Not Available | Positive | 100119 - 102653 | 96491.3 |
| valyl-trna synthetase | SAMN04489724_0478 | Not Available | Negative | 102952 - 105702 | 104677.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
