Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489724_0873 | Not Available | Positive | 546667 - 546909 | 8261.28 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN04489724_0874 | Not Available | Negative | 547268 - 547969 | 27487.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04489724_0875 | Not Available | Positive | 548880 - 550019 | 42070.6 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04489724_0876 | Not Available | Positive | 550020 - 550703 | 26103.1 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04489724_0877 | Not Available | Positive | 550861 - 552771 | 71732.2 |
| hypothetical protein | SAMN04489724_0878 | Not Available | Positive | 553242 - 554828 | 58352.1 |
| hypothetical protein | SAMN04489724_0879 | Not Available | Negative | 555324 - 555758 | 15825.2 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04489724_0880 | Not Available | Negative | 555825 - 557006 | 43919.6 |
| transporter, sss family | SAMN04489724_0881 | Not Available | Negative | 556993 - 558390 | 49918.4 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04489724_0882 | Not Available | Negative | 558401 - 560020 | 60836.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
