Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489724_0202 | Not Available | Positive | 5191021 - 5191749 | 26453.0 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN04489724_0203 | Not Available | Negative | 5191805 - 5193448 | 63019.7 |
| hypothetical protein | SAMN04489724_0204 | Not Available | Positive | 5193474 - 5193590 | 4571.75 |
| lsu ribosomal protein l34p | SAMN04489724_0205 | Not Available | Positive | 5193587 - 5193745 | 6193.73 |
| ribonuclease p protein component | SAMN04489724_0206 | Not Available | Positive | 5193794 - 5194189 | 15211.8 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN04489724_0207 | Not Available | Positive | 5194281 - 5195942 | 62112.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04489724_0208 | Not Available | Positive | 5195948 - 5196637 | 24864.1 |
| protein of unknown function | SAMN04489724_0209 | Not Available | Positive | 5196634 - 5197143 | 19356.7 |
| transposase dde domain-containing protein | SAMN04489724_0212 | Not Available | Positive | 5197842 - 5198152 | 11604.9 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04489724_0214 | Not Available | Negative | 5198554 - 5200911 | 89547.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
