Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489724_4701 | Not Available | Positive | 4816734 - 4817606 | 31117.7 |
| pas domain s-box-containing protein | SAMN04489724_4702 | Not Available | Negative | 4817669 - 4818736 | 40503.1 |
| hypothetical protein | SAMN04489724_4703 | Not Available | Positive | 4819022 - 4819753 | 27579.6 |
| hypothetical protein | SAMN04489724_4704 | Not Available | Positive | 4819772 - 4820779 | 36844.0 |
| protein of unknown function | SAMN04489724_4705 | Not Available | Negative | 4820853 - 4821350 | 18893.3 |
| hypothetical protein | SAMN04489724_4706 | Not Available | Positive | 4821570 - 4823876 | 89109.5 |
| uncharacterized membrane protein ygl010w | SAMN04489724_4707 | Not Available | Negative | 4823870 - 4824349 | 18332.2 |
| glycine/d-amino acid oxidase | SAMN04489724_4708 | Not Available | Positive | 4824425 - 4825552 | 42195.4 |
| transporter, nhac family | SAMN04489724_4709 | Not Available | Positive | 4825603 - 4827066 | 52076.7 |
| 3'-5' exonuclease | SAMN04489724_4710 | Not Available | Positive | 4827063 - 4827662 | 22530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
