Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04489724_4437 | Not Available | Positive | 4545601 - 4546506 | 32830.4 |
| four helix bundle protein | SAMN04489724_4438 | Not Available | Negative | 4546591 - 4546968 | 14088.4 |
| hypothetical protein | SAMN04489724_4439 | Not Available | Negative | 4546946 - 4547113 | 6541.78 |
| methionyl-trna synthetase | SAMN04489724_4440 | Not Available | Negative | 4547241 - 4549301 | 77562.6 |
| dna-binding transcriptional regulator, acrr family | SAMN04489724_4441 | Not Available | Negative | 4549399 - 4550031 | 23720.9 |
| protein of unknown function | SAMN04489724_4443 | Not Available | Positive | 4550929 - 4551189 | 10296.3 |
| protein of unknown function | SAMN04489724_4444 | Not Available | Positive | 4551202 - 4551462 | 10074.7 |
| dna ligase (nad+) | SAMN04489724_4445 | Not Available | Positive | 4551832 - 4554282 | 92013.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04489724_4446 | Not Available | Positive | 4554432 - 4555295 | 30799.5 |
| exodeoxyribonuclease vii large subunit | SAMN04489724_4447 | Not Available | Positive | 4555298 - 4556608 | 48603.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
