Algoriphagus locisalis strain DSM 23445

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus locisalis strain DSM 23445 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits a mesophilic growth pattern, with an optimal temperature for growth noted at 29°C. The genetic structure of Algoriphagus locisalis includes a single replicon, which is significant for its genetic stability and replication processes. The strain has been cataloged under the accession number FPBF00000000.1, which provides a reference point for researchers interested in studying its genetic makeup. The specific traits of Algoriphagus locisalis, particularly its aerobic nature and mesophilic temperature range, suggest that it may thrive in environments that are moderate in temperature and rich in oxygen. From an ecological perspective, the characteristics of Algoriphagus locisalis may indicate its role in natural ecosystems, particularly in the degradation of organic materials in aerobic conditions. Its non-motility suggests it may be adapted to stable environments where it can effectively utilize available resources without the need for movement. Overall, the study of Algoriphagus locisalis strain DSM 23445 can provide insights into the microbial diversity of aerobic ecosystems and the functional roles of bacteria in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus locisalis
Strainstrain DSM 23445

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus locisalis strain DSM 23445 genome assembly, contig:

Gene Summary

Adenine Count

1599752 bp

Thymine Count

1590373 bp

Guanine Count

1106612 bp

Cytosine Count

1127181 bp

Genome Length

5426160 bp

Protein-coding Genes

4676 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter, dctm subunitSAMN04489724_4376Not AvailableNegative4471226 - 447252145522.5
trap-type c4-dicarboxylate transport system, small permease componentSAMN04489724_4377Not AvailableNegative4472521 - 447300918319.2
tripartite atp-independent transporter solute receptor, dctp familySAMN04489724_4378Not AvailableNegative4473034 - 447402036671.2
altronate hydrolaseSAMN04489724_4379Not AvailablePositive4474313 - 447595958959.6
predicted dehydrogenaseSAMN04489724_4380Not AvailableNegative4475956 - 447699637410.8
3-dehydro-l-gulonate 2-dehydrogenaseSAMN04489724_4381Not AvailableNegative4476983 - 447800537382.8
pectate lyaseSAMN04489724_4382Not AvailableNegative4478080 - 447943549541.0
catechol 2,3-dioxygenaseSAMN04489724_4383Not AvailableNegative4479447 - 447983014140.1
pectate lyaseSAMN04489724_4384Not AvailableNegative4479847 - 448137955721.8
hypothetical proteinSAMN04489724_4385Not AvailableNegative4481424 - 448308561242.3

Displaying genes 3931 – 3940 of 4717 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.