Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04489724_4325 | Not Available | Positive | 4395777 - 4396070 | 11229.7 |
| hypothetical protein | SAMN04489724_4326 | Not Available | Positive | 4396060 - 4396326 | 10314.3 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04489724_4327 | Not Available | Negative | 4396368 - 4397075 | 26617.5 |
| choline dehydrogenase | SAMN04489724_4328 | Not Available | Negative | 4397079 - 4398821 | 64217.1 |
| hypothetical protein | SAMN04489724_4329 | Not Available | Negative | 4399296 - 4400636 | 50671.2 |
| protein of unknown function | SAMN04489724_4330 | Not Available | Negative | 4400640 - 4401332 | 25434.9 |
| starch-binding associating with outer membrane | SAMN04489724_4331 | Not Available | Negative | 4401337 - 4403232 | 70861.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489724_4332 | Not Available | Negative | 4403243 - 4406392 | 116954.0 |
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN04489724_4333 | Not Available | Positive | 4407058 - 4409586 | 95772.7 |
| dna repair protein radc | SAMN04489724_4334 | Not Available | Negative | 4410071 - 4410541 | 17132.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
