Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | SAMN04489724_3650 | Not Available | Positive | 3643751 - 3645259 | 54395.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04489724_3651 | Not Available | Positive | 3645262 - 3646668 | 50644.7 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04489724_3652 | Not Available | Positive | 3646789 - 3647379 | 21988.5 |
| d-citramalate synthase | SAMN04489724_3653 | Not Available | Positive | 3647386 - 3648972 | 59166.6 |
| 3-isopropylmalate dehydrogenase | SAMN04489724_3654 | Not Available | Positive | 3648941 - 3650008 | 38731.4 |
| hypothetical protein | SAMN04489724_3655 | Not Available | Negative | 3650038 - 3650271 | 9033.27 |
| protein of unknown function | SAMN04489724_3656 | Not Available | Negative | 3650264 - 3650491 | 8591.36 |
| hypothetical protein | SAMN04489724_3657 | Not Available | Negative | 3650496 - 3650663 | 6424.96 |
| protein of unknown function | SAMN04489724_3658 | Not Available | Negative | 3650670 - 3650918 | 9742.63 |
| trna pseudouridine38-40 synthase | SAMN04489724_3659 | Not Available | Positive | 3651082 - 3651867 | 30132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
