Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489724_0700 | Not Available | Positive | 359917 - 361527 | 63167.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489724_0701 | Not Available | Positive | 361709 - 362899 | 44404.0 |
| hypothetical protein | SAMN04489724_0702 | Not Available | Positive | 362896 - 364083 | 46512.1 |
| polysaccharide deacetylase | SAMN04489724_0703 | Not Available | Positive | 364085 - 365104 | 39092.7 |
| polysaccharide export outer membrane protein | SAMN04489724_0704 | Not Available | Positive | 365101 - 365913 | 29996.3 |
| capsular exopolysaccharide family | SAMN04489724_0705 | Not Available | Positive | 365910 - 368363 | 93381.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04489724_0706 | Not Available | Positive | 368382 - 369107 | 27242.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489724_0707 | Not Available | Positive | 369517 - 370134 | 24115.1 |
| fecr protein | SAMN04489724_0708 | Not Available | Positive | 370242 - 371255 | 38365.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489724_0709 | Not Available | Positive | 371430 - 374945 | 131112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
