Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine2605 synthase | SAMN04489724_3430 | Not Available | Positive | 3415798 - 3417126 | 49916.4 |
| thioredoxin | SAMN04489724_3431 | Not Available | Negative | 3417155 - 3417514 | 13521.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04489724_3432 | Not Available | Negative | 3417650 - 3418201 | 20253.4 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04489724_3433 | Not Available | Negative | 3418305 - 3418838 | 20683.8 |
| beta-barrel assembly machine subunit bama | SAMN04489724_3434 | Not Available | Negative | 3418931 - 3421627 | 101958.0 |
| undecaprenyl diphosphate synthase | SAMN04489724_3435 | Not Available | Negative | 3421635 - 3422420 | 29470.5 |
| hypothetical protein | SAMN04489724_3436 | Not Available | Negative | 3422456 - 3423283 | 30948.1 |
| nad+ kinase | SAMN04489724_3437 | Not Available | Negative | 3423310 - 3424185 | 32557.1 |
| hypothetical protein | SAMN04489724_3438 | Not Available | Negative | 3424189 - 3424854 | 24948.7 |
| chromate transporter | SAMN04489724_3439 | Not Available | Negative | 3424948 - 3426147 | 44225.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
