Algoriphagus locisalis strain DSM 23445

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus locisalis strain DSM 23445 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits a mesophilic growth pattern, with an optimal temperature for growth noted at 29°C. The genetic structure of Algoriphagus locisalis includes a single replicon, which is significant for its genetic stability and replication processes. The strain has been cataloged under the accession number FPBF00000000.1, which provides a reference point for researchers interested in studying its genetic makeup. The specific traits of Algoriphagus locisalis, particularly its aerobic nature and mesophilic temperature range, suggest that it may thrive in environments that are moderate in temperature and rich in oxygen. From an ecological perspective, the characteristics of Algoriphagus locisalis may indicate its role in natural ecosystems, particularly in the degradation of organic materials in aerobic conditions. Its non-motility suggests it may be adapted to stable environments where it can effectively utilize available resources without the need for movement. Overall, the study of Algoriphagus locisalis strain DSM 23445 can provide insights into the microbial diversity of aerobic ecosystems and the functional roles of bacteria in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus locisalis
Strainstrain DSM 23445

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus locisalis strain DSM 23445 genome assembly, contig:

Gene Summary

Adenine Count

1599752 bp

Thymine Count

1590373 bp

Guanine Count

1106612 bp

Cytosine Count

1127181 bp

Genome Length

5426160 bp

Protein-coding Genes

4676 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane-bound lytic murein transglycosylase fSAMN04489724_3389Not AvailablePositive3350257 - 335165153002.2
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04489724_3390Not AvailableNegative3351734 - 335220716825.5
gnt-i system high-affinity gluconate transporterSAMN04489724_3391Not AvailableNegative3352507 - 335382046326.6
por secretion system c-terminal sorting domain-containing proteinSAMN04489724_3392Not AvailableNegative3354005 - 335631184350.1
protein of unknown functionSAMN04489724_3393Not AvailablePositive3356355 - 335754545618.4
excinuclease abc subunit bSAMN04489724_3394Not AvailablePositive3357768 - 335981077477.6
putative dna-binding domain-containing proteinSAMN04489724_3395Not AvailablePositive3360034 - 336066924270.8
hypothetical proteinSAMN04489724_3396Not AvailablePositive3361007 - 33611384910.82
pyridoxal-phosphate dependent enzymeSAMN04489724_3397Not AvailableNegative3361197 - 336212934801.8
23s rrna pseudouridine1911/1915/1917 synthaseSAMN04489724_3398Not AvailablePositive3362188 - 336322239183.0

Displaying genes 2951 – 2960 of 4717 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.