Algoriphagus locisalis strain DSM 23445

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus locisalis strain DSM 23445 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits a mesophilic growth pattern, with an optimal temperature for growth noted at 29°C. The genetic structure of Algoriphagus locisalis includes a single replicon, which is significant for its genetic stability and replication processes. The strain has been cataloged under the accession number FPBF00000000.1, which provides a reference point for researchers interested in studying its genetic makeup. The specific traits of Algoriphagus locisalis, particularly its aerobic nature and mesophilic temperature range, suggest that it may thrive in environments that are moderate in temperature and rich in oxygen. From an ecological perspective, the characteristics of Algoriphagus locisalis may indicate its role in natural ecosystems, particularly in the degradation of organic materials in aerobic conditions. Its non-motility suggests it may be adapted to stable environments where it can effectively utilize available resources without the need for movement. Overall, the study of Algoriphagus locisalis strain DSM 23445 can provide insights into the microbial diversity of aerobic ecosystems and the functional roles of bacteria in nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus locisalis
Strainstrain DSM 23445

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus locisalis strain DSM 23445 genome assembly, contig:

Gene Summary

Adenine Count

1599752 bp

Thymine Count

1590373 bp

Guanine Count

1106612 bp

Cytosine Count

1127181 bp

Genome Length

5426160 bp

Protein-coding Genes

4676 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted rna-binding protein, contains pua-like domainSAMN04489724_2972Not AvailableNegative2870642 - 287104015235.2
dna polymerase (family 10)SAMN04489724_2973Not AvailablePositive2871236 - 287298165859.4
hypothetical proteinSAMN04489724_2974Not AvailablePositive2873044 - 287332810450.7
hypothetical proteinSAMN04489724_2975Not AvailablePositive2873393 - 287385717123.2
hypothetical proteinSAMN04489724_2976Not AvailableNegative2873873 - 287452325108.3
rna polymerase sigma-70 factor, ecf subfamilySAMN04489724_2977Not AvailableNegative2874531 - 287502218980.7
atp-dependent clp protease atp-binding subunit clpcSAMN04489724_2978Not AvailableNegative2875295 - 287782093744.0
wbqc-like protein family proteinSAMN04489724_2979Not AvailableNegative2877902 - 287852824614.7
trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc familySAMN04489724_2980Not AvailableNegative2878530 - 287915923496.7
8-oxo-dgtp diphosphataseSAMN04489724_2981Not AvailableNegative2879163 - 287959716217.8

Displaying genes 2541 – 2550 of 4717 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.