Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus locisalis |
| Strain | strain DSM 23445 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1599752 bp
Thymine Count
1590373 bp
Guanine Count
1106612 bp
Cytosine Count
1127181 bp
Genome Length
5426160 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489724_0519 | Not Available | Positive | 152124 - 152633 | 19854.7 |
| hypothetical protein | SAMN04489724_0520 | Not Available | Positive | 152620 - 153210 | 22766.4 |
| protein of unknown function | SAMN04489724_0521 | Not Available | Negative | 153243 - 153992 | 28499.2 |
| protein of unknown function (du1801) | SAMN04489724_0522 | Not Available | Negative | 153999 - 154415 | 15894.4 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04489724_0523 | Not Available | Positive | 154618 - 157053 | 90914.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489724_0524 | Not Available | Positive | 157512 - 160652 | 115263.0 |
| susd family protein | SAMN04489724_0525 | Not Available | Positive | 160665 - 162158 | 55739.1 |
| glyoxylase i family protein | SAMN04489724_0526 | Not Available | Negative | 162229 - 162618 | 14948.8 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04489724_0527 | Not Available | Negative | 162670 - 163977 | 48794.2 |
| starch-binding associating with outer membrane | SAMN04489724_0528 | Not Available | Negative | 164045 - 165442 | 51645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
