Algoriphagus locisalis strain DSM 23445

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus locisalis strain DSM 23445 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and optimal growth temperature of 29.0°C. This strain is part of the genus Algoriphagus, which is known for its preference for marine environments, suggesting a potential adaptation to specific ecological niches. Being Gram-negative, A. locisalis exhibits a thin peptidoglycan layer surrounded by an outer membrane that contains lipopolysaccharides, a feature that may influence its interactions in aquatic ecosystems. The aerobic nature of this bacterium indicates that it relies on oxygen for its metabolic processes, which could play a significant role in biogeochemical cycles within its habitat. The optimal growth temperature of 29.0°C implies an adaptation to moderately cool environments, which may be typical of certain marine habitats. This temperature preference also raises questions about its potential role in the microbial community dynamics at varying thermal conditions, particularly in the context of climate change where temperature fluctuations are increasingly common. Overall, the traits of Algoriphagus locisalis strain DSM 23445 suggest it may occupy a specific ecological niche within marine ecosystems, contributing to the degradation of organic matter and influencing nutrient cycling processes. Further studies could elucidate its functional roles in these environments, enhancing our understanding of microbial life in marine systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus locisalis
Strainstrain DSM 23445

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus locisalis strain DSM 23445


Gene Summary

Adenine Count

1599752 bp

Thymine Count

1590373 bp

Guanine Count

1106612 bp

Cytosine Count

1127181 bp

Genome Length

5426160 bp

Protein-coding Genes

4676 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gliding motility-associated c-terminal domain-containing proteinSAMN04489724_0392Not Available+1 - 252989201.4
type ix secretion system membrane protein, porp/sprf familySAMN04489724_0393Not Available+2658 - 362036106.5
signal transduction histidine kinaseSAMN04489724_0394Not Available-3780 - 498845103.0
hypothetical proteinSAMN04489724_0395Not Available+5051 - 51825055.36
response regulator receiver domain-containing proteinSAMN04489724_0396Not Available-5375 - 578515831.3
two component regulator propellerSAMN04489724_0397Not Available-5775 - 840899618.2
hypothetical proteinSAMN04489724_0398Not Available-8880 - 90295624.55
bor proteinSAMN04489724_0399Not Available+9647 - 99139690.77
hypothetical proteinSAMN04489724_0400Not Available-10218 - 104127828.86
dna-binding response regulator, lytr/algr familySAMN04489724_0401Not Available-10396 - 1109126807.4

Displaying genes 1 – 10 of 4717 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites