Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus amargosae |
| Strain | strain DSM 46136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
755912 bp
Thymine Count
755883 bp
Guanine Count
2183753 bp
Cytosine Count
2172631 bp
Genome Length
5869713 bp
Protein-coding Genes
5657 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05660657_05216 | Not Available | Negative | 5345634 - 5346179 | 19824.6 |
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN05660657_05217 | Not Available | Negative | 5346181 - 5346876 | 25914.5 |
| crotonyl-coa carboxylase/reductase | SAMN05660657_05218 | Not Available | Positive | 5347446 - 5348074 | 23166.4 |
| gaf domain-containing protein | SAMN05660657_05219 | Not Available | Negative | 5348075 - 5348501 | 15227.9 |
| histidine kinase-like atpase domain-containing protein | SAMN05660657_05220 | Not Available | Positive | 5348884 - 5349393 | 17897.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN05660657_05221 | Not Available | Positive | 5350329 - 5351213 | 31867.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660657_05222 | Not Available | Positive | 5351210 - 5352133 | 33749.1 |
| hypothetical protein | SAMN05660657_05223 | Not Available | Positive | 5353107 - 5354066 | 33745.5 |
| dienelactone hydrolase | SAMN05660657_05224 | Not Available | Negative | 5354309 - 5355040 | 25859.1 |
| methyltransferase domain-containing protein | SAMN05660657_05225 | Not Available | Negative | 5355364 - 5356179 | 28873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

