Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit cSAMN05660657_05146Not AvailablePositive5271201 - 527324375099.3
upf0042 nucleotide-binding proteinSAMN05660657_05147Not AvailablePositive5273240 - 527426536904.7
conserved hypothetical protein, cofd-relatedSAMN05660657_05148Not AvailablePositive5274307 - 527523931787.6
hypothetical proteinSAMN05660657_05149Not AvailablePositive5275346 - 527632635059.2
diguanylate cyclase (ggdef) domain-containing proteinSAMN05660657_05150Not AvailablePositive5276489 - 527818659733.7
glyceraldehyde-3-phosphate dehydrogenase (nad+)SAMN05660657_05151Not AvailablePositive5278297 - 527930435259.9
phosphoglycerate kinaseSAMN05660657_05152Not AvailablePositive5279304 - 528049741142.9
triosephosphate isomeraseSAMN05660657_05153Not AvailablePositive5280510 - 528132528125.6
peptide/nickel transport system substrate-binding proteinSAMN05660657_05154Not AvailablePositive5281356 - 528316461927.3
preprotein translocase subunit secgSAMN05660657_05155Not AvailablePositive5283200 - 52834338097.47

Displaying genes 5131 – 5140 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.