Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus amargosae |
| Strain | strain DSM 46136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
755912 bp
Thymine Count
755883 bp
Guanine Count
2183753 bp
Cytosine Count
2172631 bp
Genome Length
5869713 bp
Protein-coding Genes
5657 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN05660657_04654 | Not Available | Positive | 4766669 - 4767640 | 34429.1 |
| hypothetical protein | SAMN05660657_04655 | Not Available | Positive | 4767769 - 4767933 | 5987.51 |
| hypothetical protein | SAMN05660657_04656 | Not Available | Negative | 4767935 - 4768615 | 24294.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660657_04657 | Not Available | Positive | 4768750 - 4769856 | 37904.7 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05660657_04658 | Not Available | Negative | 4769869 - 4770852 | 33380.8 |
| succinyldiaminopimelate desuccinylase | SAMN05660657_04659 | Not Available | Positive | 4770906 - 4772027 | 39058.1 |
| hypothetical protein | SAMN05660657_04660 | Not Available | Positive | 4772024 - 4772866 | 30007.9 |
| diviva domain-containing protein | SAMN05660657_04661 | Not Available | Positive | 4772876 - 4773295 | 14391.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05660657_04662 | Not Available | Positive | 4773288 - 4773752 | 17242.1 |
| putative membrane protein | SAMN05660657_04663 | Not Available | Negative | 4774274 - 4774999 | 24888.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

