Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-threonine ammonia-lyaseSAMN05660657_04165Not AvailablePositive4262458 - 426375344683.1
bacteriophytochrome (light-regulated signal transduction histidine kinase)SAMN05660657_04166Not AvailableNegative4263781 - 426601877642.8
anti-anti-sigma factorSAMN05660657_04167Not AvailableNegative4266030 - 426638012134.8
serine/threonine-protein kinase rsbwSAMN05660657_04168Not AvailablePositive4266451 - 426687915559.4
hypothetical proteinSAMN05660657_04169Not AvailableNegative4266884 - 426751922485.5
f420-dependent oxidoreductase, g6pdh familySAMN05660657_04170Not AvailableNegative4267571 - 426853634564.7
pp_04113SAMN05660657_04171Not AvailablePositive4268729 - 4269892Not Available
cytosine/adenosine deaminaseSAMN05660657_04172Not AvailablePositive4270186 - 427163451392.8
sugar lactone lactonase yvreSAMN05660657_04173Not AvailablePositive4271645 - 427254431216.5
phosphoserine phosphatase rsbu, n-terminal domainSAMN05660657_04174Not AvailableNegative4272567 - 427286910895.0

Displaying genes 4171 – 4180 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.