Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-xylose transport system permease proteinSAMN05660657_04045Not AvailableNegative4149216 - 415050243189.0
d-xylose transport system atp-binding proteinSAMN05660657_04046Not AvailableNegative4150506 - 415130628090.2
monosaccharide abc transporter substrate-binding protein, cut2 family (tc 3.a.1.2.-)SAMN05660657_04047Not AvailableNegative4151378 - 415248738293.9
acetyl-coa acyltransferaseSAMN05660657_04048Not AvailablePositive4152728 - 415395142768.9
3-hydroxyacyl-coa dehydrogenaseSAMN05660657_04049Not AvailablePositive4153948 - 415603272989.5
uncharacterized conserved protein yqgv, upf0045/duf77 familySAMN05660657_04050Not AvailableNegative4156210 - 415650010002.9
1-deoxy-d-xylulose-5-phosphate synthaseSAMN05660657_04051Not AvailableNegative4156497 - 415841068251.5
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN05660657_04052Not AvailablePositive4158620 - 415981340552.8
hypothetical proteinSAMN05660657_04053Not AvailableNegative4159878 - 416024613205.8
hypothetical proteinSAMN05660657_04054Not AvailableNegative4160546 - 41606895383.65

Displaying genes 4051 – 4060 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.