Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage integrase family proteinSAMN05660657_03582Not AvailablePositive3646950 - 364751620383.6
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN05660657_03583Not AvailableNegative3647632 - 364876839586.2
protein of unknown functionSAMN05660657_03584Not AvailablePositive3648861 - 365016548492.8
uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like familySAMN05660657_03585Not AvailablePositive3650237 - 365059312706.8
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN05660657_03586Not AvailablePositive3650680 - 365133622837.0
short chain dehydrogenaseSAMN05660657_03587Not AvailablePositive3651466 - 365179510871.0
phage integrase family proteinSAMN05660657_03588Not AvailablePositive3651768 - 36519807603.25
hypothetical proteinSAMN05660657_03589Not AvailableNegative3652721 - 36529216704.45
hypothetical proteinSAMN05660657_03590Not AvailableNegative3652918 - 365326211834.4
hypothetical proteinSAMN05660657_03591Not AvailableNegative3654181 - 365448611077.1

Displaying genes 3591 – 3600 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.