Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemolysin, contains cbs domainsSAMN05660657_03362Not AvailableNegative3409144 - 341047547897.3
probable rrna maturation factorSAMN05660657_03363Not AvailableNegative3410480 - 341098318301.8
phosphate starvation-inducible protein phohSAMN05660657_03364Not AvailableNegative3410989 - 341204437924.7
enoyl-coa hydratase/carnithine racemaseSAMN05660657_03365Not AvailableNegative3412209 - 341303628846.4
histidine triad (hit) family proteinSAMN05660657_03366Not AvailableNegative3413098 - 341345712554.0
phosphonate transport system substrate-binding proteinSAMN05660657_03367Not AvailablePositive3413567 - 341455934352.1
phosphonate transport system atp-binding proteinSAMN05660657_03368Not AvailablePositive3414622 - 341529923029.9
phosphonate transport system permease proteinSAMN05660657_03369Not AvailablePositive3415296 - 341690354872.7
16s rrna (uracil1498-n3)-methyltransferaseSAMN05660657_03370Not AvailableNegative3416999 - 341776926784.2
molecular chaperone dnajSAMN05660657_03371Not AvailableNegative3417766 - 341890239621.8

Displaying genes 3371 – 3380 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.