Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome association toxin past (rata) of the ratab toxin-antitoxin moduleSAMN05660657_02960Not AvailablePositive2993696 - 299412716193.4
arsenite-transporting atpaseSAMN05660657_02961Not AvailablePositive2994133 - 299537441855.6
hypothetical proteinSAMN05660657_02962Not AvailablePositive2995371 - 299568510643.4
glucokinaseSAMN05660657_02963Not AvailablePositive2995686 - 299668733579.0
hypothetical proteinSAMN05660657_02964Not AvailableNegative2996708 - 299741224842.3
1-acyl-sn-glycerol-3-phosphate acyltransferaseSAMN05660657_02965Not AvailablePositive2997575 - 299833327649.6
hypothetical proteinSAMN05660657_02966Not AvailablePositive2998493 - 29987719344.11
nhap-type na+/h+ or k+/h+ antiporterSAMN05660657_02967Not AvailablePositive2998926 - 300022144939.3
protein of unknown functionSAMN05660657_02968Not AvailablePositive3000248 - 300073318813.2
methyl-accepting chemotaxis proteinSAMN05660657_02969Not AvailableNegative3000741 - 300286472253.6

Displaying genes 2971 – 2980 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.