Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN05660657_00257Not AvailablePositive270359 - 27184953067.6
adp-heptose:lps heptosyltransferaseSAMN05660657_00258Not AvailablePositive271843 - 27288035335.3
glycosyl transferases group 1SAMN05660657_00259Not AvailablePositive272877 - 27386936336.2
glycosyltransferase involved in cell wall bisynthesisSAMN05660657_00260Not AvailablePositive273866 - 27511043562.2
d-sedoheptulose 7-phosphate isomeraseSAMN05660657_00261Not AvailablePositive275131 - 27579622707.8
rfae bifunctional protein, domain i/rfae bifunctional protein, domain iiSAMN05660657_00262Not AvailablePositive275793 - 27718145827.5
adp-heptose:lps heptosyltransferaseSAMN05660657_00263Not AvailablePositive277223 - 27813431183.4
von willebrand factor type a domain-containing proteinSAMN05660657_00264Not AvailableNegative278131 - 27977155542.9
dtdp-glucose 4,6-dehydrataseSAMN05660657_00265Not AvailableNegative279895 - 28092337363.7
abc-type branched-chain amino acid transport system, substrate-binding proteinSAMN05660657_00266Not AvailableNegative281069 - 28237946402.9

Displaying genes 281 – 290 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.