Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus amargosae |
| Strain | strain DSM 46136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
755912 bp
Thymine Count
755883 bp
Guanine Count
2183753 bp
Cytosine Count
2172631 bp
Genome Length
5869713 bp
Protein-coding Genes
5657 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05660657_00257 | Not Available | Positive | 270359 - 271849 | 53067.6 |
| adp-heptose:lps heptosyltransferase | SAMN05660657_00258 | Not Available | Positive | 271843 - 272880 | 35335.3 |
| glycosyl transferases group 1 | SAMN05660657_00259 | Not Available | Positive | 272877 - 273869 | 36336.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05660657_00260 | Not Available | Positive | 273866 - 275110 | 43562.2 |
| d-sedoheptulose 7-phosphate isomerase | SAMN05660657_00261 | Not Available | Positive | 275131 - 275796 | 22707.8 |
| rfae bifunctional protein, domain i/rfae bifunctional protein, domain ii | SAMN05660657_00262 | Not Available | Positive | 275793 - 277181 | 45827.5 |
| adp-heptose:lps heptosyltransferase | SAMN05660657_00263 | Not Available | Positive | 277223 - 278134 | 31183.4 |
| von willebrand factor type a domain-containing protein | SAMN05660657_00264 | Not Available | Negative | 278131 - 279771 | 55542.9 |
| dtdp-glucose 4,6-dehydratase | SAMN05660657_00265 | Not Available | Negative | 279895 - 280923 | 37363.7 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN05660657_00266 | Not Available | Negative | 281069 - 282379 | 46402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

