Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospholipase/carboxylesteraseSAMN05660657_02226Not AvailablePositive2238619 - 223931422931.1
nadh dehydrogenaseSAMN05660657_02227Not AvailableNegative2239384 - 224082952076.6
pimeloyl-acp methyl ester carboxylesteraseSAMN05660657_02228Not AvailablePositive2240959 - 224164824034.4
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN05660657_02229Not AvailablePositive2241653 - 224281939228.2
monosaccharide abc transporter atp-binding protein, cut2 family (tc 3.a.1.2.-)SAMN05660657_02230Not AvailablePositive2243025 - 224461156599.2
ribose transport system permease proteinSAMN05660657_02231Not AvailablePositive2244608 - 224579839776.8
monosaccharide abc transporter substrate-binding protein, cut2 family (tc 3.a.1.2.-)SAMN05660657_02232Not AvailablePositive2245917 - 224697236197.9
predicted dehydrogenaseSAMN05660657_02233Not AvailablePositive2247035 - 224821641889.5
sugar phosphate isomerase/epimeraseSAMN05660657_02234Not AvailablePositive2248271 - 224927837730.2
hypothetical proteinSAMN05660657_02235Not AvailableNegative2249348 - 224976714224.7

Displaying genes 2241 – 2250 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.