Geodermatophilus amargosae strain DSM 46136

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus amargosae strain DSM 46136 is an aerobic bacterium characterized by its cocci shape. This strain is notable for possessing flagella, which are likely involved in its motility in aerobic environments. It has a single replicon, indicating a streamlined genetic organization. The strain is cataloged under accession number FPBA00000000.1, which provides a reference for its genomic data. The aerobic nature of G. amargosae suggests that it thrives in environments rich in oxygen, potentially influencing its ecological niche. From a biological perspective, the presence of flagella in G. amargosae may enhance its ability to navigate through its habitat, allowing it to colonize diverse surfaces. This motility could be advantageous in environments where nutrient availability fluctuates or where competition with other microorganisms is high. Understanding the traits of G. amargosae contributes to our knowledge of microbial diversity and adaptability, particularly in aerobic habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus amargosae
Strainstrain DSM 46136

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus amargosae strain DSM 46136 genome assembly,

Gene Summary

Adenine Count

755912 bp

Thymine Count

755883 bp

Guanine Count

2183753 bp

Cytosine Count

2172631 bp

Genome Length

5869713 bp

Protein-coding Genes

5657 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05660657_01279Not AvailablePositive1276329 - 12765206698.13
4-carboxymuconolactone decarboxylaseSAMN05660657_01280Not AvailableNegative1276528 - 127692614597.2
3-oxoadipate enol-lactonaseSAMN05660657_01281Not AvailableNegative1276923 - 127770226852.8
3-carboxy-cis,cis-muconate cycloisomeraseSAMN05660657_01282Not AvailableNegative1277699 - 127902743765.0
protocatechuate 3,4-dioxygenase alpha subunitSAMN05660657_01283Not AvailableNegative1279078 - 127972823092.9
protocatechuate 3,4-dioxygenase, beta subunitSAMN05660657_01284Not AvailableNegative1279728 - 128048328112.0
thioredoxin reductase (nadph)SAMN05660657_01285Not AvailableNegative1280552 - 128225560072.1
predicted atpaseSAMN05660657_01286Not AvailablePositive1282412 - 128497689653.2
acetoacetate decarboxylase (adc)SAMN05660657_01287Not AvailableNegative1284995 - 128584029305.2
transcriptional regulator, iclr familySAMN05660657_01288Not AvailablePositive1285940 - 128671627521.3

Displaying genes 1301 – 1310 of 5724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.